feat: Add PubMed Central (PMC) support - #4
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Implemented a new PMCSearcher for fetching paper metadata, downloading PDFs, and reading text content from PubMed Central. - Created `paper_search_mcp/academic_platforms/pmc.py` with the PMCSearcher class. - Updated `paper_search_mcp/server.py` to include MCP tools for PMC (search_pmc, download_pmc, read_pmc_paper). - Added comprehensive unit tests in `tests/test_pmc.py`, including mocks for external dependencies. - Ensured `pyproject.toml` has necessary dependencies (no changes were needed for PMC itself as deps were already present or standard lib). - Corrected various import errors and capitalization issues in `paper_search_mcp/academic_platforms/__init__.py` that were uncovered during testing. - Refined abstract and date parsing in `PMCSearcher` for robustness.
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Implemented a new PMCSearcher for fetching paper metadata, downloading PDFs, and reading text content from PubMed Central.
paper_search_mcp/academic_platforms/pmc.pywith the PMCSearcher class.paper_search_mcp/server.pyto include MCP tools for PMC (search_pmc, download_pmc, read_pmc_paper).tests/test_pmc.py, including mocks for external dependencies.pyproject.tomlhas necessary dependencies (no changes were needed for PMC itself as deps were already present or standard lib).paper_search_mcp/academic_platforms/__init__.pythat were uncovered during testing.PMCSearcherfor robustness.